- Acinetobacter spp.
- Actinobacillus equuli
- Actinobacillus lignieresii
- Actinobacillus spp.
- Actinomyces spp.
- Aeromonas hydrophila (A. liquefaciens)
- Aeromonas salmonicida
- Aeromonas spp.
- Aliivibrio salmonicida (Vibrio salmonicida)
- Alpha-hemolytic Streptococcus
- Anaerobic bacteria
- Anaplasma phagocytophilum
- Aspergillus fumigatus
- Aspergillus spp.
- Bacillus spp.
- Bacteroides fragilis
- Bacteroides spp.
- Bartonella spp.
- Beta-hemolytic Streptococci
- Bibersteinia trehalosi
- Bordetella bronchiseptica
- Borrelia burgdorferi
- Brachyspira spp.
- Brucella abortus
- Brucella canis
- Campylobacter spp.
- Candida spp.
- Candidatus Mycoplasma haematoparvum
- Chlamydia felis
- Chlamydia spp.
- Citrobacter spp.
- Clostridium difficile
- Clostridium perfringens
- Clostridium spp.
- Clostridium tetani
- Corynebacterium pseudotuberculosis
- Corynebacterium spp.
- Dermatophilus congolensis
- Dichelobacter nodosus
- Edwardsiella ictaluri
- Edwardsiella piscicida
- Enterobacter aerogenes
- Enterobacter spp.
- Enterococcus cecorum
- Enterococcus spp.
- Erysipelothrix rhusiopathiae
- Escherichia coli
- Flavobacterium branchiophilum
- Flavobacterium columnare
- Flavobacterium psychrophilum
- Fusarium spp.
- Fusobacterium spp.
- Haemophilus parasuis
- Helicobacter spp.
- Histophilus somni
- Klebsiella pneumoniae
- Klebsiella spp.
- Lactococcus lactis
- Lawsonia intracellularis
- Leptospira interrogans serovar Pomona type kennewicki
- Leptospira spp.
- Listeria monocytogenes
- Listonella anguillarum
- Mannheimia haemolytica
- Moritella viscosa
- Mycobacterium lepraemurium
- Mycoplasma arginini
- Mycoplasma haemocanis
- Mycoplasma haemofelis
- Mycoplasma hyorhinis
- Mycoplasma hyosynoviae
- Mycoplasma ovipneumonia
- Mycoplasma spp.
- Neorickettsia findlayensis (Neorickettsia finleia)
- Neorickettsia risticii
- Neorickettsia spp.
- Nocardia asteroides
- Nocardia jeguni
- Nocardia salmonicida
- Nocardia spp.
- Non-hemolytic Streptococcus
- Nontuberculous Mycobacterium spp.
- Pasteurella multocida
- Pasteurella spp.
- Penicillium spp.
- Peptostreptococcus spp.
- Piscirickettsia salmonis
- Prevotella spp.
- Proteus mirabilis
- Proteus spp.
- Proteus vulgaris
- Pseudomonas aeruginosa
- Pseudomonas fluorescens
- Pseudomonas spp.
- Renibacterium salmoninarum
- Rhodococcus equi
- Rickettsia rickettsii
- Salmonella spp.
- Staphylococci, coagulase negative
- Staphylococcus aureus
- Staphylococcus pseudintermedius
- Staphylococcus schleiferi
- Staphylococcus spp.
- Streptococcus dysgalactiae
- Streptococcus dysgalactiae subsp equisimilis
- Streptococcus equi
- Streptococcus equi subsp equi
- Streptococcus equi subsp zooepidemicus
- Streptococcus spp.
- Streptococcus suis
- Streptococcus uberis
- Streptococcus zooepidemicus
- Tenacibaculum finnmarkense
- Tenacibaculum maritimum
- Trueperella pyogenes
- Yersinia pestis
- Yersinia ruckeri
Pathogens
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